Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930915.1_cds_XP_016477866.1_69555
CDS Infomation

[gene=LOC107799291] [db_xref=GeneID:107799291] [protein=protein ROOT PRIMORDIUM DEFECTIVE 1-like] [protein_id=XP_016477866.1] [location=25728..27104] [gbkey=CDS]
Sequence

ATGAGAATTCTACAACTCAGGTGGAAGAATCCGGCGAAGATATCATCAAAAACTCCACTT
TCATTCGGCCCTTTCAATTCCACAACCCAAACCCGGTGGAAGAAACCAGCAAACACAGCC
CAAACCCGACTGGAAAACCGGACCCGAGACCCGAATCTCGATAAACTCACAGCTCAATAC
CGGAGACTTAAACTCATCCTCAACCTCTACGACGTCGTATCTGCTAAAAAACGCGGTCGT
TATGTCTCAGTTCAGTCACTTTCCAAGTGGGCCCCACATGCCGGCATTAACACCATCACC
GCCGGTGATCTTCTCCGGAAATACCCCCATATTTTTGAGGTGTTTACACATCATATTAAG
CGTAATTTATGCTGCAGGTTTAGGGAGAAATTTGTCATTTTGCTTAAGCAAGAAGAAGAT
TTCATATCACAAAATGAACATGAAAATGTGATGAGAATAAAGAAGATTTTAATGATGTCT
GTTAATGGTACTATACATTTGCATGCACTTAGACTAATGAGGACTGAATTGGGTTTGCCT
GAAAACTTCAGGGACTCAGTTGTAATAAAGTATGATGAAGTTTTTAGGATGGTGGATTTG
GAAATTGTTGAATTAATTAATAGAAATGGAGCAGATGAGAGTTTTGGGGTGGCAAAGGTT
GAATCTTGGAGGCAAAAGGAGTATACTGAGAAATGGTTGAGTGAATTTGAGGTCAAATAT
GCATTTCCTATTCATTTCCCAACCGGGTTTAAGATAGAACCAGGTTATAGAGAAAAATTG
AAAAATTGGCAAAGGCTTCCTTATGTTAAGCCTTACGAAAGAGAACTCACGTATCACTTG
AATGGACTAAAATCTGAACCCTTGGGACAATCTTTAGGATGTGATGAGTTGATATCGAGG
TCAAAGGGAGTTGGAAAGCATAGTTTTGGAGGGGTTGAGCGGTATGAGAAGCGAGTTGTG
GCGATTATTCATGAAATTTTGAGCTTGACTGTTGAGAAGTTGGTGCCCCTCGAAAGGTTG
GCACATTATAAGAAGGACCTCGGCATTGAAGTTAATATTCGTGAGTTGTTGTTGAAGCAT
CCTGGGATATTTTACATATCCACTAAAGGGAATACTGAAATTGTTTTCCTTAGAGAAGCA
TATAATAAAGGGTGTTTGATTGAGTTGAACCCAATTTATGATTTGAGAAGAAAGGTATTG
GAGCTTCTCTTGTTGGGGAACCGTCATACGGGAGAGTTGAGAACGGAAAGGGAACTGACG
GATGATATTAGAGACGTGACAGATGATGAAAATGGATGGGAAAGCAGAGAGGGTGACTTT
GTTATTCCAATTCTCGAGAGTTTTTCTGATCATGACAGCGATGACAATTTGAACTAG

Peptide Sequence

PEP ID

XP_016477866.1
PEP Infomation

PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Nicotiana tabacum]
Sequence

MRILQLRWKNPAKISSKTPLSFGPFNSTTQTRWKKPANTAQTRLENRTRDPNLDKLTAQY
RRLKLILNLYDVVSAKKRGRYVSVQSLSKWAPHAGINTITAGDLLRKYPHIFEVFTHHIK
RNLCCRFREKFVILLKQEEDFISQNEHENVMRIKKILMMSVNGTIHLHALRLMRTELGLP
ENFRDSVVIKYDEVFRMVDLEIVELINRNGADESFGVAKVESWRQKEYTEKWLSEFEVKY
AFPIHFPTGFKIEPGYREKLKNWQRLPYVKPYERELTYHLNGLKSEPLGQSLGCDELISR
SKGVGKHSFGGVERYEKRVVAIIHEILSLTVEKLVPLERLAHYKKDLGIEVNIRELLLKH
PGIFYISTKGNTEIVFLREAYNKGCLIELNPIYDLRRKVLELLLLGNRHTGELRTERELT
DDIRDVTDDENGWESREGDFVIPILESFSDHDSDDNLN

Transcript Sequence

Gene sequence data has not been registered.